STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GATA2GATA binding protein 2. (473 aa)    
Predicted Functional Partners:
TAL1
TAL bHLH transcription factor 1, erythroid differentiation factor.
   
 0.909
LDB1
LIM domain binding 1.
    
 0.850
LDB2
LIM domain binding 2.
    
 0.831
TCF12
Transcription factor 12.
   
 0.734
SPI1
Spi-1 proto-oncogene.
    
 0.728
GATA1
GATA binding protein 1.
   
 
0.714
EP300
E1A binding protein p300.
    
 0.708
YY1
YY1 transcription factor.
    
 0.704
NFYB
Nuclear transcription factor Y subunit beta.
    
 
 0.702
MYB
MYB proto-oncogene, transcription factor.
   
 0.664
Your Current Organism:
Monodelphis domestica
NCBI taxonomy Id: 13616
Other names: gray short-tailed opossum
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.