Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ATOH1 | DBX1 | ENSMODP00000024053 | ENSMODP00000011321 | Atonal bHLH transcription factor 1. | Developing brain homeobox 1. | 0.466 |
ATOH1 | OLIG2 | ENSMODP00000024053 | ENSMODP00000026347 | Atonal bHLH transcription factor 1. | Oligodendrocyte transcription factor 2. | 0.519 |
DBX1 | ATOH1 | ENSMODP00000011321 | ENSMODP00000024053 | Developing brain homeobox 1. | Atonal bHLH transcription factor 1. | 0.466 |
DBX1 | IRX3 | ENSMODP00000011321 | ENSMODP00000016509 | Developing brain homeobox 1. | Iroquois homeobox 3. | 0.435 |
DBX1 | LHX6 | ENSMODP00000011321 | ENSMODP00000024558 | Developing brain homeobox 1. | LIM homeobox 6. | 0.581 |
DBX1 | OLIG2 | ENSMODP00000011321 | ENSMODP00000026347 | Developing brain homeobox 1. | Oligodendrocyte transcription factor 2. | 0.489 |
DBX1 | SLC6A5 | ENSMODP00000011321 | ENSMODP00000011421 | Developing brain homeobox 1. | Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. | 0.429 |
DBX1 | TAL2 | ENSMODP00000011321 | ENSMODP00000027791 | Developing brain homeobox 1. | TAL bHLH transcription factor 2. | 0.544 |
DBX1 | TBR1 | ENSMODP00000011321 | ENSMODP00000006606 | Developing brain homeobox 1. | T-box brain transcription factor 1. | 0.416 |
IRX3 | DBX1 | ENSMODP00000016509 | ENSMODP00000011321 | Iroquois homeobox 3. | Developing brain homeobox 1. | 0.435 |
IRX3 | OLIG2 | ENSMODP00000016509 | ENSMODP00000026347 | Iroquois homeobox 3. | Oligodendrocyte transcription factor 2. | 0.551 |
LHX6 | DBX1 | ENSMODP00000024558 | ENSMODP00000011321 | LIM homeobox 6. | Developing brain homeobox 1. | 0.581 |
OLIG2 | ATOH1 | ENSMODP00000026347 | ENSMODP00000024053 | Oligodendrocyte transcription factor 2. | Atonal bHLH transcription factor 1. | 0.519 |
OLIG2 | DBX1 | ENSMODP00000026347 | ENSMODP00000011321 | Oligodendrocyte transcription factor 2. | Developing brain homeobox 1. | 0.489 |
OLIG2 | IRX3 | ENSMODP00000026347 | ENSMODP00000016509 | Oligodendrocyte transcription factor 2. | Iroquois homeobox 3. | 0.551 |
OLIG2 | TBR1 | ENSMODP00000026347 | ENSMODP00000006606 | Oligodendrocyte transcription factor 2. | T-box brain transcription factor 1. | 0.627 |
SLC6A5 | DBX1 | ENSMODP00000011421 | ENSMODP00000011321 | Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. | Developing brain homeobox 1. | 0.429 |
TAL2 | DBX1 | ENSMODP00000027791 | ENSMODP00000011321 | TAL bHLH transcription factor 2. | Developing brain homeobox 1. | 0.544 |
TBR1 | DBX1 | ENSMODP00000006606 | ENSMODP00000011321 | T-box brain transcription factor 1. | Developing brain homeobox 1. | 0.416 |
TBR1 | OLIG2 | ENSMODP00000006606 | ENSMODP00000026347 | T-box brain transcription factor 1. | Oligodendrocyte transcription factor 2. | 0.627 |