STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E2F6E2F_TDP domain-containing protein. (290 aa)    
Predicted Functional Partners:
TFDP2
Transcription factor.
  
 0.811
TFDP1
Transcription factor.
   
 0.775
PCGF6
Polycomb group ring finger 6.
    
 0.742
L3MBTL2
L3MBTL histone methyl-lysine binding protein 2.
    
 0.731
CBX3
Chromo domain-containing protein.
   
 0.726
MAX
BHLH domain-containing protein.
    
 0.680
RNF2
Ring finger protein 2.
    
 0.664
RING1
Ring finger protein 1.
    
 0.654
LIN9
Lin-9 DREAM MuvB core complex component.
    
 0.626
RB1
RB transcriptional corepressor 1.
   
 0.612
Your Current Organism:
Monodelphis domestica
NCBI taxonomy Id: 13616
Other names: gray short-tailed opossum
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