STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM174BFamily with sequence similarity 174 member B. (169 aa)    
Predicted Functional Partners:
LYSMD4
LysM domain-containing protein.
      
 0.713
ST8SIA2
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2; Belongs to the glycosyltransferase 29 family.
      
 0.555
RGMA
Repulsive guidance molecule BMP co-receptor a.
      
 0.454
ENSMODP00000055520
Uncharacterized protein.
      
 0.452
ENSMODP00000058655
Secretory carrier-associated membrane protein.
      
 0.452
LYSMD3
Uncharacterized protein.
      
 0.450
TBC1D16
TBC1 domain family member 16.
      
 0.444
NUP50
Nucleoporin 50.
      
 0.405
FAM124B
Family with sequence similarity 124 member B.
      
 0.405
CRYGN
Crystallin gamma N; Belongs to the beta/gamma-crystallin family.
      
 0.404
Your Current Organism:
Monodelphis domestica
NCBI taxonomy Id: 13616
Other names: gray short-tailed opossum
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.