STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARHGEF10Rho guanine nucleotide exchange factor 10. (1357 aa)    
Predicted Functional Partners:
RAB3GAP1
RAB3 GTPase activating protein catalytic subunit 1.
      
 0.636
ARHGEF33
Rho guanine nucleotide exchange factor 33.
      
 0.529
ARHGEF2
Rho/Rac guanine nucleotide exchange factor 2.
   
 0.525
ARHGEF12
Rho guanine nucleotide exchange factor 12.
   
 0.496
TRIM67
Tripartite motif containing 67.
      
 0.454
NDRG1
N-myc downstream regulated 1.
   
  
 0.453
FAM89A
Uncharacterized protein.
      
 0.450
GMIP
GEM interacting protein.
      
 0.408
RAB8B
RAB8B, member RAS oncogene family.
      
 0.403
RAB8A
RAB8A, member RAS oncogene family.
      
 0.403
Your Current Organism:
Monodelphis domestica
NCBI taxonomy Id: 13616
Other names: gray short-tailed opossum
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.