Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ATM | ATMIN | ENSMODP00000059879 | ENSMODP00000019069 | TAN domain-containing protein. | ATM interactor. | 0.728 |
ATM | CHEK2 | ENSMODP00000059879 | ENSMODP00000010421 | TAN domain-containing protein. | Checkpoint kinase 2. | 0.997 |
ATM | RAD18 | ENSMODP00000059879 | ENSMODP00000005762 | TAN domain-containing protein. | RAD18 E3 ubiquitin protein ligase. | 0.450 |
ATMIN | ATM | ENSMODP00000019069 | ENSMODP00000059879 | ATM interactor. | TAN domain-containing protein. | 0.728 |
ATMIN | CHEK2 | ENSMODP00000019069 | ENSMODP00000010421 | ATM interactor. | Checkpoint kinase 2. | 0.482 |
ATMIN | DYNLL1 | ENSMODP00000019069 | ENSMODP00000003816 | ATM interactor. | Dynein light chain. | 0.487 |
ATMIN | DYNLL2 | ENSMODP00000019069 | ENSMODP00000044058 | ATM interactor. | Dynein light chain. | 0.450 |
ATMIN | LOC100021555 | ENSMODP00000019069 | ENSMODP00000033135 | ATM interactor. | Dynein light chain. | 0.487 |
ATMIN | RAD18 | ENSMODP00000019069 | ENSMODP00000005762 | ATM interactor. | RAD18 E3 ubiquitin protein ligase. | 0.404 |
ATMIN | UBR2 | ENSMODP00000019069 | ENSMODP00000023757 | ATM interactor. | E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. | 0.404 |
ATMIN | UBR3 | ENSMODP00000019069 | ENSMODP00000010271 | ATM interactor. | E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. | 0.459 |
ATMIN | UBR5 | ENSMODP00000019069 | ENSMODP00000007389 | ATM interactor. | Ubiquitin protein ligase E3 component n-recognin 5. | 0.556 |
ATMIN | WRNIP1 | ENSMODP00000019069 | ENSMODP00000034744 | ATM interactor. | WRN helicase interacting protein 1. | 0.484 |
CHEK2 | ATM | ENSMODP00000010421 | ENSMODP00000059879 | Checkpoint kinase 2. | TAN domain-containing protein. | 0.997 |
CHEK2 | ATMIN | ENSMODP00000010421 | ENSMODP00000019069 | Checkpoint kinase 2. | ATM interactor. | 0.482 |
CHEK2 | RAD18 | ENSMODP00000010421 | ENSMODP00000005762 | Checkpoint kinase 2. | RAD18 E3 ubiquitin protein ligase. | 0.586 |
DYNLL1 | ATMIN | ENSMODP00000003816 | ENSMODP00000019069 | Dynein light chain. | ATM interactor. | 0.487 |
DYNLL1 | DYNLL2 | ENSMODP00000003816 | ENSMODP00000044058 | Dynein light chain. | Dynein light chain. | 0.962 |
DYNLL1 | LOC100021555 | ENSMODP00000003816 | ENSMODP00000033135 | Dynein light chain. | Dynein light chain. | 0.900 |
DYNLL2 | ATMIN | ENSMODP00000044058 | ENSMODP00000019069 | Dynein light chain. | ATM interactor. | 0.450 |
page 1 of 2