STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOX5SRY-box transcription factor 5. (763 aa)    
Predicted Functional Partners:
SOX6
SRY-box transcription factor 6.
  
 
 
0.741
CTNNB1
Catenin beta 1.
   
 0.678
ZBTB20
Zinc finger and BTB domain containing 20.
    
 
 0.654
CYP19A1
Cytochrome P450 family 19 subfamily A member 1; Belongs to the cytochrome P450 family.
   
  
 0.605
FOXB1
Forkhead box B1.
      
 0.597
TCF7
Transcription factor 7.
     
0.568
SOX13
SRY-box transcription factor 13.
    
 
0.558
FEZF2
FEZ family zinc finger 2.
    
 
 0.553
CEP85
Centrosomal protein 85.
    
 
 0.522
JUP
Junction plakoglobin.
   
 0.508
Your Current Organism:
Monodelphis domestica
NCBI taxonomy Id: 13616
Other names: gray short-tailed opossum
Server load: low (26%) [HD]