STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAD1RAD1 checkpoint DNA exonuclease. (281 aa)    
Predicted Functional Partners:
HUS1
Checkpoint protein; Belongs to the HUS1 family.
    
 0.999
RAD9A
Cell cycle checkpoint control protein; Belongs to the rad9 family.
    
 0.996
RAD9B
Cell cycle checkpoint control protein; Belongs to the rad9 family.
    
 0.996
ATR
Uncharacterized protein.
    
 0.991
RAD17
RAD17 checkpoint clamp loader component.
   
 0.988
RFC4
Replication factor C subunit 4.
   
 0.983
WRN
WRN RecQ like helicase.
   
 0.970
SLF1
SMC5-SMC6 complex localization factor 1.
    
 0.969
RFC5
Replication factor C subunit 5.
   
 0.963
RFC2
Replication factor C subunit 2.
   
 0.958
Your Current Organism:
Monodelphis domestica
NCBI taxonomy Id: 13616
Other names: gray short-tailed opossum
Server load: low (34%) [HD]