STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTTPMicrosomal triglyceride transfer protein. (894 aa)    
Predicted Functional Partners:
APOB
Uncharacterized protein.
   
 0.982
F7ASJ7_MONDO
Uncharacterized protein.
   
 0.911
ENSMODP00000051548
Kazal-like domain-containing protein.
   
 0.848
P4HB
Protein disulfide-isomerase.
   
 0.759
ENSMODP00000055038
Thioredoxin domain-containing protein.
   
 0.759
ENSMODP00000057145
Thioredoxin domain-containing protein.
   
 0.759
ENSMODP00000057283
Thioredoxin domain-containing protein.
   
 0.759
PDIA2
Protein disulfide-isomerase.
   
 0.699
HMGCR
3-hydroxy-3-methylglutaryl coenzyme A reductase.
      
 0.624
APOA2
Apolipoprotein A2.
   
 
 0.619
Your Current Organism:
Monodelphis domestica
NCBI taxonomy Id: 13616
Other names: gray short-tailed opossum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.