STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HDHD3Haloacid dehalogenase like hydrolase domain containing 3. (248 aa)    
Predicted Functional Partners:
PSAT1
Phosphoserine aminotransferase.
   
 
 0.765
SHMT1
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
    
 0.724
ENSMODP00000050060
Uncharacterized protein.
   
 
 0.596
NDRG3
NDRG family member 3.
   
 
 0.582
GNE
Glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase.
   
 
 0.579
NUDT12
Nudix hydrolase 12.
   
 
 0.550
NUDT13
Nudix hydrolase 13.
   
 
 0.534
F6PPX4_MONDO
5_nucleotid_C domain-containing protein.
   
 
 0.485
LOC100032364
Uncharacterized protein; Belongs to the 5'-nucleotidase family.
   
 
 0.485
NT5E
Metallophos domain-containing protein; Belongs to the 5'-nucleotidase family.
   
 
 0.485
Your Current Organism:
Monodelphis domestica
NCBI taxonomy Id: 13616
Other names: gray short-tailed opossum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.