STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASCL4Achaete-scute family bHLH transcription factor 4. (183 aa)    
Predicted Functional Partners:
ACSL4
Acyl-CoA synthetase long chain family member 4.
    
 
 0.580
TCF12
Transcription factor 12.
   
 0.546
TCF4
Transcription factor 4.
   
 0.546
NEPRO
Nucleolus and neural progenitor protein.
      
 0.516
MAIP1
Matrix AAA peptidase interacting protein 1.
      
 0.509
TCF3
Transcription factor 3.
   
 0.503
ARHGAP42
Rho GTPase activating protein 42.
      
 0.495
PHF24
PHD finger protein 24.
      
 0.414
STOX2
Storkhead box 2.
   
  
 0.410
LDB2
LIM domain binding 2.
    
 0.406
Your Current Organism:
Monodelphis domestica
NCBI taxonomy Id: 13616
Other names: gray short-tailed opossum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.