STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RFX8RFX family member 8, lacking RFX DNA binding domain. (604 aa)    
Predicted Functional Partners:
ATR
Uncharacterized protein.
    
 
 0.575
PIGQ
Phosphatidylinositol glycan anchor biosynthesis class Q.
      
 0.564
TUSC1
Tumor suppressor candidate 1.
      
 0.563
RFX5
Regulatory factor X5.
      
 0.563
LLPH
LLP homolog, long-term synaptic facilitation factor.
      
 0.551
LENG1
Leukocyte receptor cluster member 1.
      
 0.550
CHEK2
Checkpoint kinase 2.
   
 
 0.546
CBLN4
Cerebellin 4 precursor.
      
 0.533
PDAP1
PDGFA associated protein 1.
      
 0.487
ZMYM3
Zinc finger MYM-type containing 3.
      
 0.459
Your Current Organism:
Monodelphis domestica
NCBI taxonomy Id: 13616
Other names: gray short-tailed opossum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.