STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LAMB2Laminin subunit beta 2. (1807 aa)    
Predicted Functional Partners:
ITGA6
Integrin subunit alpha 6; Belongs to the integrin alpha chain family.
    
 0.937
ITGAV
Integrin subunit alpha V; Belongs to the integrin alpha chain family.
    
 0.934
DAG1
Dystroglycan 1.
    
 0.931
ITGA2
Integrin subunit alpha 2; Belongs to the integrin alpha chain family.
    
 0.929
ITGB1
Integrin beta; Belongs to the integrin beta chain family.
   
 0.926
ITGA1
Integrin subunit alpha 1; Belongs to the integrin alpha chain family.
    
 0.925
ITGB4
Integrin beta.
   
 0.924
LAMA2
Laminin subunit alpha 2.
   
0.923
ITGA9
Integrin subunit alpha 9; Belongs to the integrin alpha chain family.
    
 0.913
ITGB8
Integrin beta; Belongs to the integrin beta chain family.
    
 0.912
Your Current Organism:
Monodelphis domestica
NCBI taxonomy Id: 13616
Other names: gray short-tailed opossum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.