STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGX05454.1Stage III sporulation protein AH; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (187 aa)    
Predicted Functional Partners:
AGX06558.1
Peptidase M23; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.985
AGX05455.1
Stage III sporulation protein AG; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.984
AGX05456.1
Stage III sporulation protein AF; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.950
AGX05457.1
Stage III sporulation protein AE; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.909
AGX03954.1
Spore coat protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
    0.819
AGX05458.1
Stage III sporulation protein AD; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
 0.811
AGX05713.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
 0.804
AGX06642.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
 0.794
AGX02287.1
Sporulation protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
    0.777
AGX03503.1
Sporulation protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.771
Your Current Organism:
Bacillus infantis
NCBI taxonomy Id: 1367477
Other names: B. infantis NRRL B-14911, Bacillus infantis NRRL B-14911
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.