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SNOG_03302 protein (Parastagonospora nodorum) - STRING interaction network
"SNOG_03302" - ATP-dependent RNA helicase DBP3 in Parastagonospora nodorum
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Known Interactions
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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SNOG_03302ATP-dependent RNA helicase DBP3; ATP-dependent RNA helicase required for 60S ribosomal subunit synthesis. Involved in efficient pre-rRNA processing, predominantly at site A3, which is necessary for the normal formation of 25S and 5.8S rRNAs (By similarity); Belongs to the DEAD box helicase family. DDX5/DBP2 subfamily (592 aa)    
Predicted Functional Partners:
SNOG_12266
Uncharacterized protein (518 aa)
   
 
  0.986
SNOG_07247
Uncharacterized protein (763 aa)
     
 
  0.986
SNOG_00837
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome (676 aa)
     
  0.983
SNOG_02955
ATP-dependent RNA helicase DBP9; ATP-binding RNA helicase involved in the biogenesis of 60S ribosomal subunits and is required for the normal formation of 25S and 5.8S rRNAs; Belongs to the DEAD box helicase family. DDX56/DBP9 subfamily (597 aa)
   
 
0.982
SNOG_06808
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome (733 aa)
     
  0.982
SNOG_01967
ATP-dependent RNA helicase DRS1; ATP-binding RNA helicase involved in ribosome assembly (808 aa)
   
0.981
SNOG_05757
Uncharacterized protein (581 aa)
   
 
  0.980
SNOG_09268
Uncharacterized protein (497 aa)
   
 
  0.979
SNOG_16412
Uncharacterized protein (986 aa)
     
 
  0.978
SNOG_07095
ATP-dependent RNA helicase DBP4; ATP-dependent RNA helicase required for ribosome biogenesis. Involved in the release of U14 snoRNA in pre-ribosomal complexes. Required for pre-rRNA cleavage at site A2 (By similarity) (803 aa)
   
   
0.977
Your Current Organism:
Parastagonospora nodorum
NCBI taxonomy Id: 13684
Other names: Leptosphaeria nodorum, P. nodorum, Parastagonospora nodorum, Parastagonospora nodorum (Berk.) Quaedvlieg, Verkley & Crous 2013, Phaeosphaeria nodorum, Septoria nodorum, Stagonospora nodorum
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