STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X2H3Q0PRP1 splicing factor, N-terminal-domain-containing protein. (912 aa)    
Predicted Functional Partners:
A0A1X2H4S7
Spliceosomal protein DIB1; Essential role in pre-mRNA splicing. Also essential for entry into mitosis (G2/M progression) as well as for chromosome segregation during mitosis; Belongs to the DIM1 family.
    
 0.999
A0A1X2H5Y7
WD domain-containing protein.
   
 0.999
A0A1X2H9V1
P-loop containing nucleoside triphosphate hydrolase protein.
   
 0.999
A0A1X2HFZ4
P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the DEAD box helicase family.
   
 0.999
A0A1X2HHI8
Pre-mRNA-processing-splicing factor 8.
   
 0.999
A0A1X2H768
Sec63 Brl domain-domain-containing protein.
   
 0.998
A0A1X2H3V7
Small nuclear ribonucleoprotein Sm D3.
   
 0.997
A0A1X2HUV7
SART-1 protein.
   
 0.997
A0A1X2H2J1
Pre-mRNA processing factor 3-domain-containing protein.
   
 0.996
A0A1X2H5L9
Pre-mRNA-processing factor 31.
   
 0.996
Your Current Organism:
Syncephalastrum racemosum
NCBI taxonomy Id: 13706
Other names: S. racemosum, fungal sp. RS07OS
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