STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X2H643Uncharacterized protein. (385 aa)    
Predicted Functional Partners:
A0A1X2H620
Alkyl transferase; Belongs to the UPP synthase family.
     
 0.619
A0A1X2H5V2
Farnesyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.
    
  0.613
A0A1X2HF06
Solanesyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.
    
  0.576
A0A1X2HMC5
Isoprenoid synthase domain-containing protein; Belongs to the FPP/GGPP synthase family.
    
  0.576
A0A1X2HIK1
Geranylgeranyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.
    
  0.560
A0A1X2HL85
Geranylgeranyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.
    
  0.560
A0A1X2HFB5
Peptidase M24, structural domain-containing protein; Belongs to the peptidase M24B family.
  
 
  0.496
A0A1X2H3T2
Peptidase M24, structural domain-containing protein.
    
  0.475
A0A1X2H659
Peptidase M24, structural domain-containing protein.
    
  0.475
A0A1X2HAS3
Peptidase M24, structural domain-containing protein.
    
  0.475
Your Current Organism:
Syncephalastrum racemosum
NCBI taxonomy Id: 13706
Other names: S. racemosum, fungal sp. RS07OS
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.