STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X2H6Y0Cyclin-domain-containing protein. (332 aa)    
Predicted Functional Partners:
A0A1X2H764
Glycerophosphoryl diester phosphodiesterase family-domain-containing protein.
    
 0.808
A0A1X2HGJ8
Glycerophosphoryl diester phosphodiesterase family-domain-containing protein.
    
 0.808
A0A1X2HFM3
SPOC like C-terminal domain-containing protein.
    
 0.753
A0A1X2H9H8
ATP dependent DNA ligase domain-domain-containing protein; Belongs to the ATP-dependent DNA ligase family.
    
 0.744
A0A1X2H6U1
SPOC like C-terminal domain-containing protein.
    
 0.704
A0A1X2H6M0
DNA ligase.
    
 0.648
A0A1X2HCX8
DNA ligase.
    
 0.648
A0A1X2HCE1
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
    
 0.622
A0A1X2HNV2
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.622
A0A1X2HRC7
Ribonuclease H-like domain-containing protein.
    
 0.622
Your Current Organism:
Syncephalastrum racemosum
NCBI taxonomy Id: 13706
Other names: S. racemosum, fungal sp. RS07OS
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