STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X2H843Importin subunit alpha; Belongs to the importin alpha family. (528 aa)    
Predicted Functional Partners:
A0A1X2HNB9
Cse1-domain-containing protein.
   
 0.939
A0A1X2HEM9
Armadillo-type protein.
   
 0.901
A0A1X2HT00
Armadillo-type protein.
   
 0.901
A0A1X2HP74
Uncharacterized protein.
    
 
 0.894
A0A1X2H3Y3
Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II.
   
 
 0.867
A0A1X2HBG5
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 
 0.838
A0A1X2HM70
Armadillo-type protein.
   
 
 0.830
A0A1X2HMX3
ULP_PROTEASE domain-containing protein.
    
 
 0.827
A0A1X2HUM5
Nuclear cap-binding protein subunit 2.
    
 
 0.813
A0A1X2HM88
Ribosomal RNA-processing protein 8; S-adenosyl-L-methionine-dependent methyltransferase that specifically methylates the N(1) position of adenine in helix 25.1 in 25S rRNA. Required both for ribosomal 40S and 60S subunits biogenesis. Required for efficient pre-rRNA cleavage at site A2. Belongs to the methyltransferase superfamily. RRP8 family.
    
   0.800
Your Current Organism:
Syncephalastrum racemosum
NCBI taxonomy Id: 13706
Other names: S. racemosum, fungal sp. RS07OS
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