STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X2HAP1HIT domain protein. (163 aa)    
Predicted Functional Partners:
A0A1X2H665
TBP-domain-containing protein.
    
 0.813
A0A1X2H2H8
Oxidoreductase, molybdopterin-binding domain-containing protein.
  
  0.796
A0A1X2H8A5
Kinase-like domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.773
A0A1X2HKK8
Uncharacterized protein.
    
 0.756
A0A1X2HLU5
BTB domain-containing protein.
    
 0.756
A0A1X2HUX0
Kinase-like domain-containing protein.
    
 0.741
A0A1X2GZ93
RNA polymerase I-specific transcription initiation factor RRN3.
    
 0.726
A0A1X2HBH0
CDK-activating kinase assembly factor MAT1-domain-containing protein.
    
 0.723
A0A1X2HP54
RNA polymerase.
   
 
  0.673
A0A1X2HKX9
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.669
Your Current Organism:
Syncephalastrum racemosum
NCBI taxonomy Id: 13706
Other names: S. racemosum, fungal sp. RS07OS
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