STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X2HCR2Rad51-domain-containing protein. (80 aa)    
Predicted Functional Partners:
A0A1X2HAU3
Ribonuclease H-like domain-containing protein.
  
 0.997
A0A1X2HQT0
RECA_2 domain-containing protein.
   
 0.973
A0A1X2HRD5
DNA recombination and repair protein Rad51; Belongs to the RecA family.
  
 0.972
A0A1X2HQ14
Uncharacterized protein.
  
 0.969
A0A1X2H1S0
BRCA2, oligonucleotide/oligosaccharide-binding, domain 1-domain-containing protein.
   
 0.968
A0A1X2H5D3
P-loop containing nucleoside triphosphate hydrolase protein.
  
 
 0.911
A0A1X2HCH0
UmuC domain-containing protein.
  
 0.910
A0A1X2H3R9
Rad52/22 family double-strand break repair protein-domain-containing protein.
    
 0.905
A0A1X2HV30
Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.
  
 0.884
A0A1X2HIR3
P-loop containing nucleoside triphosphate hydrolase protein.
  
 
 0.870
Your Current Organism:
Syncephalastrum racemosum
NCBI taxonomy Id: 13706
Other names: S. racemosum, fungal sp. RS07OS
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