STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X2HDJ4WD40-repeat-containing domain protein. (781 aa)    
Predicted Functional Partners:
A0A1X2H9H2
USP domain-containing protein.
    
 0.963
A0A1X2H7E1
WD40-repeat-containing domain protein.
    
 0.957
A0A1X2HU22
USP domain-containing protein.
    
 0.935
A0A1X2HM11
Cyclin-like protein; Belongs to the cyclin family.
   
 0.896
A0A1X2HDK4
DNA-binding protein.
   
 0.856
A0A1X2HVB9
Rix1 complex component.
   
 0.853
A0A1X2HG41
Mad3/BUB1 homology region 1-domain-containing protein.
   
 0.847
A0A1X2HLF8
Transcription initiation factor TFIID subunit A-domain-containing protein.
   
 0.844
A0A1X2H6B0
Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]
    
 0.843
A0A1X2HLS9
Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.
    
 0.843
Your Current Organism:
Syncephalastrum racemosum
NCBI taxonomy Id: 13706
Other names: S. racemosum, fungal sp. RS07OS
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.