STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X2HP40Uncharacterized protein. (467 aa)    
Predicted Functional Partners:
A0A1X2HC31
Uncharacterized protein.
    
 0.989
A0A1X2HCZ8
Uncharacterized protein.
    
 0.989
A0A1X2H0C7
Nitrogen permease regulator 2-domain-containing protein.
   
 0.988
A0A1X2HB57
Nitrogen permease regulator of amino acid transport activity 3-domain-containing protein.
    
 0.987
A0A1X2HMF0
DEP domain-containing protein.
    
 0.985
A0A1X2HDJ8
WD40-repeat-containing domain protein.
   
 0.984
A0A1X2HRQ4
Zinc_ribbon_16 domain-containing protein.
    
 0.983
A0A1X2HD37
WD40-repeat-containing domain protein; Belongs to the WD repeat SEC13 family.
    
 0.982
A0A1X2HLW0
WD_REPEATS_REGION domain-containing protein.
    
 0.982
A0A1X2HNX3
Uncharacterized protein.
    
 0.974
Your Current Organism:
Syncephalastrum racemosum
NCBI taxonomy Id: 13706
Other names: S. racemosum, fungal sp. RS07OS
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