STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X2HU90Armadillo-type protein. (391 aa)    
Predicted Functional Partners:
A0A1X2HJR4
Ribonuclease H-like domain-containing protein.
    
 
 0.865
A0A1X2HNB8
Cytochrome C oxidase copper chaperone-domain-containing protein.
    
 
 0.707
A0A1X2HFQ6
Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.
    
  0.628
COQ5
2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial; Methyltransferase required for the conversion of 2- polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3-methyl- 6-methoxy-1,4-benzoquinol (DMQH2).
    
 
 0.586
A0A1X2HL43
Anticodon-binding domain-domain-containing protein.
    
   0.582
A0A1X2HQE9
Tyrosine--tRNA ligase.
    
   0.582
A0A1X2H3Y2
Uncharacterized protein.
    
   0.560
A0A1X2H2S9
Mitochondrial outer membrane translocase complex, subunit Tom22.
    
 
 0.551
A0A1X2HP87
Endonuclease/exonuclease/phosphatase.
   
 
 0.551
A0A1X2HQZ3
Endonuclease/exonuclease/phosphatase.
   
 
 0.551
Your Current Organism:
Syncephalastrum racemosum
NCBI taxonomy Id: 13706
Other names: S. racemosum, fungal sp. RS07OS
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.