STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X2HVY4Uncharacterized protein. (101 aa)    
Predicted Functional Partners:
A0A1X2HIT0
Uncharacterized protein.
   
 0.818
A0A1X2HME6
DH domain-containing protein.
   
 0.818
A0A1X2HJA1
Uncharacterized protein.
   
 0.744
A0A1X2HCR3
Ankyrin repeat-containing domain protein.
   
 0.639
A0A1X2HN65
E3 ubiquitin ligase complex SCF subunit sconC; Belongs to the SKP1 family.
    
  0.629
A0A1X2HFA5
Uncharacterized protein.
    
  0.542
A0A1X2HHH8
RNA polymerase III transcription factor IIIC subunit-domain-containing protein.
    
  0.541
A0A1X2HFL2
Ribosomal protein S27a-domain-containing protein.
    
  0.540
A0A1X2HA27
Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family.
    
 0.533
A0A1X2HH68
SUMO-conjugating enzyme ubc9; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.526
Your Current Organism:
Syncephalastrum racemosum
NCBI taxonomy Id: 13706
Other names: S. racemosum, fungal sp. RS07OS
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