STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0002785RRM domain-containing protein. (379 aa)    
Predicted Functional Partners:
chiPu_0002195
FHA domain-containing protein.
   
 0.999
chiPu_0016287
Uncharacterized protein.
   
 0.999
chiPu_0019625
Uncharacterized protein.
    
 
 0.997
chiPu_0007176
TOG domain-containing protein.
    
 
 0.997
chiPu_0013129
CPSF_A domain-containing protein.
    
 
 0.997
chiPu_0013174
Uncharacterized protein.
    
 
 0.997
chiPu_0022606
Uncharacterized protein.
    
 
0.996
chiPu_0029412
Uncharacterized protein.
   
 0.987
chiPu_0019812
Uncharacterized protein.
   
 0.971
chiPu_0001197
Uncharacterized protein.
    
 0.969
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.