chiPu_0004938 protein (Chiloscyllium punctatum)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

chiPu_0004938

Uncharacterized protein. (598 aa)

Predicted Functional Partners:

chiPu_0006626

0.660

chiPu_0008409

0.631

chiPu_0026327

0.630

chiPu_0007897

0.626

chiPu_0000076

0.621

chiPu_0012407

0.621

chiPu_0004059

0.618

chiPu_0015822

0.618

chiPu_0023099

0.618

chiPu_0002870

0.616

Your Current Organism:

Chiloscyllium punctatum

NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
chiPu_0000076	chiPu_0002870	A0A401RN55	A0A401S277	Uncharacterized protein.	Uncharacterized protein.	0.902
chiPu_0000076	chiPu_0004059	A0A401RN55	A0A401S5I9	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family.	0.967
chiPu_0000076	chiPu_0004938	A0A401RN55	A0A401S810	Uncharacterized protein.	Uncharacterized protein.	0.621
chiPu_0000076	chiPu_0006626	A0A401RN55	A0A401SCS8	Uncharacterized protein.	Uncharacterized protein.	0.955
chiPu_0000076	chiPu_0007897	A0A401RN55	A0A401SGH3	Uncharacterized protein.	Uncharacterized protein.	0.925
chiPu_0000076	chiPu_0012407	A0A401RN55	A0A401SUA3	Uncharacterized protein.	Thioredoxin domain-containing protein; Belongs to the NDK family.	0.874
chiPu_0000076	chiPu_0015822	A0A401RN55	A0A401T3W4	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS15 family.	0.975
chiPu_0000076	chiPu_0023099	A0A401RN55	A0A401T8K2	Uncharacterized protein.	Uncharacterized protein.	0.952
chiPu_0002870	chiPu_0000076	A0A401S277	A0A401RN55	Uncharacterized protein.	Uncharacterized protein.	0.902
chiPu_0002870	chiPu_0004059	A0A401S277	A0A401S5I9	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family.	0.998
chiPu_0002870	chiPu_0004938	A0A401S277	A0A401S810	Uncharacterized protein.	Uncharacterized protein.	0.616
chiPu_0002870	chiPu_0012407	A0A401S277	A0A401SUA3	Uncharacterized protein.	Thioredoxin domain-containing protein; Belongs to the NDK family.	0.902
chiPu_0002870	chiPu_0015822	A0A401S277	A0A401T3W4	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS15 family.	0.998
chiPu_0002870	chiPu_0023099	A0A401S277	A0A401T8K2	Uncharacterized protein.	Uncharacterized protein.	0.999
chiPu_0004059	chiPu_0000076	A0A401S5I9	A0A401RN55	Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family.	Uncharacterized protein.	0.967
chiPu_0004059	chiPu_0002870	A0A401S5I9	A0A401S277	Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family.	Uncharacterized protein.	0.998
chiPu_0004059	chiPu_0004938	A0A401S5I9	A0A401S810	Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family.	Uncharacterized protein.	0.618
chiPu_0004059	chiPu_0006626	A0A401S5I9	A0A401SCS8	Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family.	Uncharacterized protein.	0.658
chiPu_0004059	chiPu_0012407	A0A401S5I9	A0A401SUA3	Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family.	Thioredoxin domain-containing protein; Belongs to the NDK family.	0.967
chiPu_0004059	chiPu_0015822	A0A401S5I9	A0A401T3W4	Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uS15 family.	0.999