STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0024388MATH domain-containing protein. (232 aa)    
Predicted Functional Partners:
chiPu_0019403
TNF receptor-associated factor.
   
0.956
chiPu_0000414
TBD domain-containing protein.
    
 0.948
chiPu_0004882
Death domain-containing protein.
    
 0.941
chiPu_0015701
Protein kinase domain-containing protein.
   
 0.931
chiPu_0025511
Protein kinase domain-containing protein.
   
 0.931
chiPu_0010264
Uncharacterized protein.
   
 0.930
chiPu_0010263
Uncharacterized protein.
   
 0.930
chiPu_0015763
Protein kinase domain-containing protein.
   
 0.923
chiPu_0001117
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.906
chiPu_0019476
Protein kinase domain-containing protein.
    
 0.904
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.