STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DNAAF1Dynein assembly factor 1, axonemal. (708 aa)    
Predicted Functional Partners:
ZMYND10
Zinc finger MYND-type containing 10.
  
 
 0.668
K7FRH8_PELSI
Uncharacterized protein.
    
 
 0.664
DNALI1
Dynein axonemal light intermediate chain 1.
   
  
 0.661
RSPH9
Radial spoke head 9 homolog.
   
 0.596
DNAI1
Dynein axonemal intermediate chain 1.
    
 
 0.589
SPAG1
Sperm associated antigen 1.
   
 
 0.573
CCDC103
Coiled-coil domain containing 103.
   
  
 0.573
CCDC39
Coiled-coil domain containing 39.
    
 
 0.569
CFAP298
Uncharacterized protein.
      
 0.565
CCDC40
Coiled-coil domain containing 40.
    
 
 0.563
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.