STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STOX1Storkhead box 1. (875 aa)    
Predicted Functional Partners:
USH2A
Usherin.
      
 0.650
WFS1
Wolframin ER transmembrane glycoprotein.
      
 0.622
SLC52A3
Solute carrier family 52 member 3.
      
 0.565
ADGRV1
Adhesion G protein-coupled receptor V1; Belongs to the G-protein coupled receptor 2 family.
      
 0.564
LRRC3B
Leucine rich repeat containing 3B.
      
 0.562
MYO6
Myosin VI; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
      
 0.560
CCAR1
Cell division cycle and apoptosis regulator 1.
      
 0.559
TMC2
Transmembrane channel-like protein.
      
 0.473
TMC1
Transmembrane channel-like protein.
      
 0.473
TNFSF13B
TNF superfamily member 13b; Belongs to the tumor necrosis factor family.
      
 0.473
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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