STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHORDC1Cysteine and histidine rich domain containing 1. (355 aa)    
Predicted Functional Partners:
SUGT1
SGT1 homolog, MIS12 kinetochore complex assembly cochaperone.
   
 
 0.739
HSP90B1
Heat shock protein 90 beta family member 1.
   
 
 0.654
HSP90AB1
Heat shock protein 90 alpha family class B member 1.
   
 
 0.648
HSP90AA1
Heat shock protein 90 alpha family class A member 1.
   
 
 0.648
PPP5C
Protein phosphatase 5 catalytic subunit.
   
 
 0.642
TRAP1
TNF receptor associated protein 1.
   
 
 0.630
TSC1
TSC complex subunit 1.
   
 
 0.630
SHC4
SHC adaptor protein 4.
      
 0.581
PFDN4
Prefoldin subunit 4.
      
 0.565
SRM
Spermidine synthase; Belongs to the spermidine/spermine synthase family.
    
 
 0.560
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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