STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHAF1AChromatin assembly factor 1 subunit A. (952 aa)    
Predicted Functional Partners:
CHAF1B
Chromatin assembly factor 1 subunit B.
   
 0.970
RBBP4
WD_REPEATS_REGION domain-containing protein.
   
 0.853
ASF1B
Anti-silencing function 1B histone chaperone.
   
 
 0.808
MCM5
DNA helicase; Belongs to the MCM family.
   
  
 0.803
MCM2
DNA helicase; Belongs to the MCM family.
   
 
 0.789
RBBP7
RB binding protein 7, chromatin remodeling factor.
   
 
 0.780
MCM3
DNA helicase; Belongs to the MCM family.
   
  
 0.777
ASF1A
Anti-silencing function 1A histone chaperone.
   
 
 0.775
POLA1
DNA polymerase.
   
 
 0.741
PCNA
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
   0.722
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.