SMU1 protein (Pelodiscus sinensis) - STRING interaction network

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Predicted Interactions

gene neighborhood

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textmining

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protein homology

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Score

SMU1

SMU1 DNA replication regulator and spliceosomal factor. (499 aa)

Predicted Functional Partners:

IK

0.998

MFAP1

0.980

ZMAT2

0.944

PRPF38A

0.935

PRPF6

0.916

SNRNP200

0.896

WBP4

0.894

LSM8

0.880

PRPF8

0.872

SF3A2

0.847

Your Current Organism:

Pelodiscus sinensis

NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
IK	LSM8	ENSPSIP00000007967	ENSPSIP00000019195	IK cytokine.	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.541
IK	MFAP1	ENSPSIP00000007967	ENSPSIP00000008192	IK cytokine.	Microfibril associated protein 1.	0.933
IK	PRPF38A	ENSPSIP00000007967	ENSPSIP00000019707	IK cytokine.	Pre-mRNA processing factor 38A.	0.887
IK	PRPF6	ENSPSIP00000007967	ENSPSIP00000008681	IK cytokine.	Pre-mRNA processing factor 6.	0.944
IK	PRPF8	ENSPSIP00000007967	ENSPSIP00000015324	IK cytokine.	Pre-mRNA processing factor 8.	0.600
IK	SMU1	ENSPSIP00000007967	ENSPSIP00000010684	IK cytokine.	SMU1 DNA replication regulator and spliceosomal factor.	0.998
IK	SNRNP200	ENSPSIP00000007967	ENSPSIP00000009777	IK cytokine.	Small nuclear ribonucleoprotein U5 subunit 200.	0.541
IK	WBP4	ENSPSIP00000007967	ENSPSIP00000006893	IK cytokine.	WW domain binding protein 4.	0.814
IK	ZMAT2	ENSPSIP00000007967	ENSPSIP00000004056	IK cytokine.	Zinc finger matrin-type 2.	0.809
LSM8	IK	ENSPSIP00000019195	ENSPSIP00000007967	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	IK cytokine.	0.541
LSM8	MFAP1	ENSPSIP00000019195	ENSPSIP00000008192	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	Microfibril associated protein 1.	0.742
LSM8	PRPF38A	ENSPSIP00000019195	ENSPSIP00000019707	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	Pre-mRNA processing factor 38A.	0.752
LSM8	PRPF6	ENSPSIP00000019195	ENSPSIP00000008681	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	Pre-mRNA processing factor 6.	0.996
LSM8	PRPF8	ENSPSIP00000019195	ENSPSIP00000015324	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	Pre-mRNA processing factor 8.	0.996
LSM8	SF3A2	ENSPSIP00000019195	ENSPSIP00000012068	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	Splicing factor 3a subunit 2.	0.916
LSM8	SMU1	ENSPSIP00000019195	ENSPSIP00000010684	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	SMU1 DNA replication regulator and spliceosomal factor.	0.880
LSM8	SNRNP200	ENSPSIP00000019195	ENSPSIP00000009777	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	Small nuclear ribonucleoprotein U5 subunit 200.	0.996
LSM8	WBP4	ENSPSIP00000019195	ENSPSIP00000006893	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	WW domain binding protein 4.	0.760
LSM8	ZMAT2	ENSPSIP00000019195	ENSPSIP00000004056	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	Zinc finger matrin-type 2.	0.935
MFAP1	IK	ENSPSIP00000008192	ENSPSIP00000007967	Microfibril associated protein 1.	IK cytokine.	0.933