STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMOD3Tropomodulin 3. (365 aa)    
Predicted Functional Partners:
NEB
Nebulin.
   
 0.672
MYL1
Myosin light chain 1.
   
 
 0.627
TNNI1
Troponin I1, slow skeletal type.
   
 
 0.507
TNNI2
Troponin I2, fast skeletal type.
   
 
 0.505
TWF1
Twinfilin actin binding protein 1.
   
 0.444
VCL
Vinculin.
   
 
 0.443
TNNC1
Troponin C1, slow skeletal and cardiac type.
   
 
  0.442
TPM1
Uncharacterized protein; Belongs to the tropomyosin family.
   
 0.431
TPM4
Tropomyosin 4.
   
 0.431
TPM3
Uncharacterized protein; Belongs to the tropomyosin family.
   
 0.431
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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