STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MRVI1Uncharacterized protein. (508 aa)    
Predicted Functional Partners:
ITPR2
Uncharacterized protein.
    
 0.948
ITPR1
Inositol 1,4,5-trisphosphate receptor type 1.
    
 0.948
K7G4B8_PELSI
Uncharacterized protein.
 
     0.943
MED4-2
Mediator of RNA polymerase II transcription subunit 4; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
   
 0.585
PRKG1
Protein kinase cGMP-dependent 1; Belongs to the protein kinase superfamily.
   
 0.585
LCP2
Lymphocyte cytosolic protein 2.
   
 0.579
FGB
Fibrinogen beta chain.
     
 0.565
F13B
Coagulation factor XIII B chain.
    
 0.547
RASGRP1
RAS guanyl releasing protein 1.
    
 0.522
ITPR3
Inositol 1,4,5-trisphosphate receptor type 3.
    
 0.507
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.