STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UHMK1U2AF homology motif kinase 1. (329 aa)    
Predicted Functional Partners:
UAP1
UDP-N-acetylglucosamine pyrophosphorylase 1.
 
    
 0.745
NUDT4
Nudix hydrolase domain-containing protein.
      
 0.562
FGD6
FYVE, RhoGEF and PH domain containing 6.
      
 0.561
STYXL1
Serine/threonine/tyrosine interacting like 1.
      
 0.549
GNE
Glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase.
      
 0.540
K7F1M4_PELSI
Uncharacterized protein.
   
 0.534
CDKN1C
Cyclin dependent kinase inhibitor 1C.
   
 0.534
CDKN1B
Cyclin dependent kinase inhibitor 1B.
   
 0.534
UAP1L1
UDP-N-acetylglucosamine pyrophosphorylase 1 like 1.
 
    
 0.517
PRPF40A
Pre-mRNA processing factor 40 homolog A.
    
 0.486
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.