Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AZL_001630 | AZL_002960 | AZL_001630 | AZL_002960 | Signaling protein; GGDEF: diguanylate cyclase domain. | Oxygen sensor diguanylate cyclase/c-di-GMP phosphodiesterase. | 0.924 |
AZL_001630 | AZL_004120 | AZL_001630 | AZL_004120 | Signaling protein; GGDEF: diguanylate cyclase domain. | Two-component response regulator modulated diguanylate cyclase. | 0.875 |
AZL_001630 | AZL_005110 | AZL_001630 | AZL_005110 | Signaling protein; GGDEF: diguanylate cyclase domain. | Diguanylate cyclase. | 0.936 |
AZL_001630 | AZL_006650 | AZL_001630 | AZL_006650 | Signaling protein; GGDEF: diguanylate cyclase domain. | Signaling protein. | 0.838 |
AZL_001630 | AZL_011360 | AZL_001630 | AZL_011360 | Signaling protein; GGDEF: diguanylate cyclase domain. | Two-component hybrid sensor and regulator, CheB glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.988 |
AZL_001630 | AZL_012420 | AZL_001630 | AZL_012420 | Signaling protein; GGDEF: diguanylate cyclase domain. | Sensory box/GGDEF/EAL domain protein. | 0.841 |
AZL_001630 | AZL_018260 | AZL_001630 | AZL_018260 | Signaling protein; GGDEF: diguanylate cyclase domain. | Hypothetical protein. | 0.823 |
AZL_001630 | AZL_024270 | AZL_001630 | AZL_024270 | Signaling protein; GGDEF: diguanylate cyclase domain. | Two-component response regulator, modulated diguanylate cyclase. | 0.638 |
AZL_001630 | rpfG | AZL_001630 | AZL_022830 | Signaling protein; GGDEF: diguanylate cyclase domain. | Two-component system response regulator. | 0.849 |
AZL_002960 | AZL_001630 | AZL_002960 | AZL_001630 | Oxygen sensor diguanylate cyclase/c-di-GMP phosphodiesterase. | Signaling protein; GGDEF: diguanylate cyclase domain. | 0.924 |
AZL_002960 | AZL_004120 | AZL_002960 | AZL_004120 | Oxygen sensor diguanylate cyclase/c-di-GMP phosphodiesterase. | Two-component response regulator modulated diguanylate cyclase. | 0.729 |
AZL_002960 | AZL_005110 | AZL_002960 | AZL_005110 | Oxygen sensor diguanylate cyclase/c-di-GMP phosphodiesterase. | Diguanylate cyclase. | 0.902 |
AZL_002960 | AZL_006650 | AZL_002960 | AZL_006650 | Oxygen sensor diguanylate cyclase/c-di-GMP phosphodiesterase. | Signaling protein. | 0.923 |
AZL_002960 | AZL_011360 | AZL_002960 | AZL_011360 | Oxygen sensor diguanylate cyclase/c-di-GMP phosphodiesterase. | Two-component hybrid sensor and regulator, CheB glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.990 |
AZL_002960 | AZL_012420 | AZL_002960 | AZL_012420 | Oxygen sensor diguanylate cyclase/c-di-GMP phosphodiesterase. | Sensory box/GGDEF/EAL domain protein. | 0.927 |
AZL_002960 | AZL_018260 | AZL_002960 | AZL_018260 | Oxygen sensor diguanylate cyclase/c-di-GMP phosphodiesterase. | Hypothetical protein. | 0.957 |
AZL_002960 | AZL_024270 | AZL_002960 | AZL_024270 | Oxygen sensor diguanylate cyclase/c-di-GMP phosphodiesterase. | Two-component response regulator, modulated diguanylate cyclase. | 0.675 |
AZL_002960 | rpfG | AZL_002960 | AZL_022830 | Oxygen sensor diguanylate cyclase/c-di-GMP phosphodiesterase. | Two-component system response regulator. | 0.875 |
AZL_004120 | AZL_001630 | AZL_004120 | AZL_001630 | Two-component response regulator modulated diguanylate cyclase. | Signaling protein; GGDEF: diguanylate cyclase domain. | 0.875 |
AZL_004120 | AZL_002960 | AZL_004120 | AZL_002960 | Two-component response regulator modulated diguanylate cyclase. | Oxygen sensor diguanylate cyclase/c-di-GMP phosphodiesterase. | 0.729 |
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