Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
AZL_001630 | AZL_002960 | Signaling protein; GGDEF: diguanylate cyclase domain. | Oxygen sensor diguanylate cyclase/c-di-GMP phosphodiesterase. | 0.924 |
AZL_001630 | AZL_006460 | Signaling protein; GGDEF: diguanylate cyclase domain. | Two-component hybrid sensor and regulator. | 0.990 |
AZL_001630 | AZL_006650 | Signaling protein; GGDEF: diguanylate cyclase domain. | Signaling protein. | 0.838 |
AZL_001630 | AZL_006810 | Signaling protein; GGDEF: diguanylate cyclase domain. | Hypothetical protein. | 0.434 |
AZL_001630 | AZL_019990 | Signaling protein; GGDEF: diguanylate cyclase domain. | Hypothetical protein. | 0.903 |
AZL_001630 | AZL_024270 | Signaling protein; GGDEF: diguanylate cyclase domain. | Two-component response regulator, modulated diguanylate cyclase. | 0.638 |
AZL_001630 | AZL_025960 | Signaling protein; GGDEF: diguanylate cyclase domain. | Two-component response regulator. | 0.759 |
AZL_002960 | AZL_001630 | Oxygen sensor diguanylate cyclase/c-di-GMP phosphodiesterase. | Signaling protein; GGDEF: diguanylate cyclase domain. | 0.924 |
AZL_002960 | AZL_006460 | Oxygen sensor diguanylate cyclase/c-di-GMP phosphodiesterase. | Two-component hybrid sensor and regulator. | 0.989 |
AZL_002960 | AZL_006650 | Oxygen sensor diguanylate cyclase/c-di-GMP phosphodiesterase. | Signaling protein. | 0.923 |
AZL_002960 | AZL_006810 | Oxygen sensor diguanylate cyclase/c-di-GMP phosphodiesterase. | Hypothetical protein. | 0.644 |
AZL_002960 | AZL_019990 | Oxygen sensor diguanylate cyclase/c-di-GMP phosphodiesterase. | Hypothetical protein. | 0.928 |
AZL_002960 | AZL_024270 | Oxygen sensor diguanylate cyclase/c-di-GMP phosphodiesterase. | Two-component response regulator, modulated diguanylate cyclase. | 0.675 |
AZL_002960 | AZL_025960 | Oxygen sensor diguanylate cyclase/c-di-GMP phosphodiesterase. | Two-component response regulator. | 0.762 |
AZL_006460 | AZL_001630 | Two-component hybrid sensor and regulator. | Signaling protein; GGDEF: diguanylate cyclase domain. | 0.990 |
AZL_006460 | AZL_002960 | Two-component hybrid sensor and regulator. | Oxygen sensor diguanylate cyclase/c-di-GMP phosphodiesterase. | 0.989 |
AZL_006460 | AZL_006650 | Two-component hybrid sensor and regulator. | Signaling protein. | 0.989 |
AZL_006460 | AZL_006810 | Two-component hybrid sensor and regulator. | Hypothetical protein. | 0.966 |
AZL_006460 | AZL_012680 | Two-component hybrid sensor and regulator. | Two-component sensor histidine kinase. | 0.548 |
AZL_006460 | AZL_016510 | Two-component hybrid sensor and regulator. | Two-component sensor histidine kinase. | 0.554 |
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