STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER05790.1Competence protein ComGA. (355 aa)    
Predicted Functional Partners:
SER05828.1
Competence protein ComGB.
 
 
 0.994
SER01356.1
Type II secretion system protein F (GspF).
 
 0.977
SER05860.1
Competence protein ComGC.
  
  
 0.941
SER01552.1
Type IV pilus assembly protein PilM.
 
 
 0.907
SER01617.1
Leader peptidase (prepilin peptidase) / N-methyltransferase.
 
 
 0.887
SER01219.1
Prepilin-type N-terminal cleavage/methylation domain-containing protein.
 
 0.865
SER01324.1
Prepilin-type N-terminal cleavage/methylation domain-containing protein.
 
 0.845
SER01847.1
Prepilin-type N-terminal cleavage/methylation domain-containing protein.
 
 0.811
SER05894.1
Competence protein ComGD.
     
 0.792
SER01176.1
Prepilin-type N-terminal cleavage/methylation domain-containing protein.
  
 0.778
Your Current Organism:
Granulicatella balaenopterae
NCBI taxonomy Id: 137733
Other names: ATCC 700813, Abiotrophia balaenopterae, CCUG 37380, CIP 105938, DSM 15827, G. balaenopterae, strain M1975/96/1
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