STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CQ394_12270Unannotated protein; Belongs to the glycosyl hydrolase 1 family. (470 aa)    
Predicted Functional Partners:
CQ394_12275
Unannotated protein; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
  
 
  0.877
CQ394_14270
Unannotated protein.
 
 0.811
CQ394_01475
Unannotated protein.
 
 
 0.808
CQ394_14165
Unannotated protein.
 
 
 0.801
CQ394_12940
Unannotated protein.
 
 0.799
CQ394_20715
Unannotated protein.
 
 
 0.758
CQ394_19680
Unannotated protein.
  
 
 0.758
CQ394_00545
Unannotated protein.
  
 
 0.758
CQ394_00565
Unannotated protein.
  
 
 0.758
rpiB
Unannotated protein.
  
 
 0.718
Your Current Organism:
Clostridium neonatale
NCBI taxonomy Id: 137838
Other names: ATCC BAA-265, C. neonatale, CCUG 46077, strain AIP 250.09, strain LCDC 99A005, strain NML 99-A-005, strain NML 99A005, strain St. Boniface Hospital 30686
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.