STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DSY1744Hypothetical protein. (285 aa)    
Predicted Functional Partners:
DSY0993
Hypothetical protein; Similarity to COG1145 Ferredoxin 2.
  
     0.508
DSY3446
Hypothetical protein; Similarity to COG1145 Ferredoxin 2.
  
     0.504
dsdA
Hypothetical protein; Similarity to COG3048 D-serine dehydratase(Evalue: 1E-150); Belongs to the serine/threonine dehydratase family. DsdA subfamily.
       0.481
DSY0261
Hypothetical protein; Similarity to COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2.
  
     0.461
rsgA
Hypothetical protein; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.
       0.455
DSY0262
Hypothetical protein.
  
     0.450
DSY3450
Hypothetical protein; Similarity to COG1145 Ferredoxin 2.
  
     0.441
DSY3897
Hypothetical protein; Similarity to COG0607 Rhodanese-related sulfurtransferases.
  
     0.435
DSY0174
Hypothetical protein; Similarity to COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain(Evalue: 2E-74).
  
     0.426
DSY0263
Hypothetical protein; Similarity to COG3420 Nitrous oxidase accessory protein(Evalue: 4E-44).
  
     0.424
Your Current Organism:
Desulfitobacterium hafniense
NCBI taxonomy Id: 138119
Other names: D. hafniense Y51, Desulfitobacterium hafniense Y51, Desulfitobacterium hafniense str. Y51, Desulfitobacterium hafniense strain Y51, Desulfitobacterium sp. Y51
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.