Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DSY1977 | DSY1978 | DSY1977 | DSY1978 | Hypothetical protein. | Hypothetical protein; Similarity to COG0840 Methyl-accepting chemotaxis protein(Evalue: 5E-69). | 0.789 |
DSY1977 | DSY2994 | DSY1977 | DSY2994 | Hypothetical protein. | Similarity to COG0643 Chemotaxis protein histidine kinase and related kinases(Evalue: 1E-135). | 0.567 |
DSY1977 | DSY3036 | DSY1977 | DSY3036 | Hypothetical protein. | Hypothetical protein; Similarity to COG1352 Methylase of chemotaxis methyl-accepting proteins(Evalue: 2E-65). | 0.460 |
DSY1977 | cheB | DSY1977 | DSY2992 | Hypothetical protein. | Hypothetical protein; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.411 |
DSY1978 | DSY1977 | DSY1978 | DSY1977 | Hypothetical protein; Similarity to COG0840 Methyl-accepting chemotaxis protein(Evalue: 5E-69). | Hypothetical protein. | 0.789 |
DSY1978 | DSY2960 | DSY1978 | DSY2960 | Hypothetical protein; Similarity to COG0840 Methyl-accepting chemotaxis protein(Evalue: 5E-69). | Hypothetical protein; Similarity to COG0835 Chemotaxis signal transduction protein. | 0.877 |
DSY1978 | DSY2970 | DSY1978 | DSY2970 | Hypothetical protein; Similarity to COG0840 Methyl-accepting chemotaxis protein(Evalue: 5E-69). | Similarity to COG1776 Chemotaxis protein CheC, inhibitor of MCP methylation(Evalue: 2E-32). | 0.713 |
DSY1978 | DSY2980 | DSY1978 | DSY2980 | Hypothetical protein; Similarity to COG0840 Methyl-accepting chemotaxis protein(Evalue: 5E-69). | Hypothetical protein; Similarity to COG0784 CheY-like receiver domain(Evalue: 5E-46). | 0.662 |
DSY1978 | DSY2993 | DSY1978 | DSY2993 | Hypothetical protein; Similarity to COG0840 Methyl-accepting chemotaxis protein(Evalue: 5E-69). | Hypothetical protein; Similarity to COG0835 Chemotaxis signal transduction protein(Evalue: 2E-28). | 0.880 |
DSY1978 | DSY2994 | DSY1978 | DSY2994 | Hypothetical protein; Similarity to COG0840 Methyl-accepting chemotaxis protein(Evalue: 5E-69). | Similarity to COG0643 Chemotaxis protein histidine kinase and related kinases(Evalue: 1E-135). | 0.901 |
DSY1978 | DSY3036 | DSY1978 | DSY3036 | Hypothetical protein; Similarity to COG0840 Methyl-accepting chemotaxis protein(Evalue: 5E-69). | Hypothetical protein; Similarity to COG1352 Methylase of chemotaxis methyl-accepting proteins(Evalue: 2E-65). | 0.849 |
DSY1978 | DSY3741 | DSY1978 | DSY3741 | Hypothetical protein; Similarity to COG0840 Methyl-accepting chemotaxis protein(Evalue: 5E-69). | Hypothetical protein; Similarity to COG0835 Chemotaxis signal transduction protein(Evalue: 8E-25). | 0.881 |
DSY1978 | cheB | DSY1978 | DSY2992 | Hypothetical protein; Similarity to COG0840 Methyl-accepting chemotaxis protein(Evalue: 5E-69). | Hypothetical protein; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.840 |
DSY1978 | cheD | DSY1978 | DSY2969 | Hypothetical protein; Similarity to COG0840 Methyl-accepting chemotaxis protein(Evalue: 5E-69). | Hypothetical protein; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family. | 0.794 |
DSY2960 | DSY1978 | DSY2960 | DSY1978 | Hypothetical protein; Similarity to COG0835 Chemotaxis signal transduction protein. | Hypothetical protein; Similarity to COG0840 Methyl-accepting chemotaxis protein(Evalue: 5E-69). | 0.877 |
DSY2960 | DSY2970 | DSY2960 | DSY2970 | Hypothetical protein; Similarity to COG0835 Chemotaxis signal transduction protein. | Similarity to COG1776 Chemotaxis protein CheC, inhibitor of MCP methylation(Evalue: 2E-32). | 0.802 |
DSY2960 | DSY2980 | DSY2960 | DSY2980 | Hypothetical protein; Similarity to COG0835 Chemotaxis signal transduction protein. | Hypothetical protein; Similarity to COG0784 CheY-like receiver domain(Evalue: 5E-46). | 0.838 |
DSY2960 | DSY2993 | DSY2960 | DSY2993 | Hypothetical protein; Similarity to COG0835 Chemotaxis signal transduction protein. | Hypothetical protein; Similarity to COG0835 Chemotaxis signal transduction protein(Evalue: 2E-28). | 0.924 |
DSY2960 | DSY2994 | DSY2960 | DSY2994 | Hypothetical protein; Similarity to COG0835 Chemotaxis signal transduction protein. | Similarity to COG0643 Chemotaxis protein histidine kinase and related kinases(Evalue: 1E-135). | 0.996 |
DSY2960 | DSY3036 | DSY2960 | DSY3036 | Hypothetical protein; Similarity to COG0835 Chemotaxis signal transduction protein. | Hypothetical protein; Similarity to COG1352 Methylase of chemotaxis methyl-accepting proteins(Evalue: 2E-65). | 0.926 |
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