STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DSY2494Hypothetical protein; Similarity to COG1804 Predicted acyl-CoA transferases/carnitine dehydratase(Evalue: 2E-88); Belongs to the CoA-transferase III family. (413 aa)    
Predicted Functional Partners:
DSY2493
Hypothetical protein; Similarity to COG0477 Permeases of the major facilitator superfamily(Evalue: 2E-54).
       0.696
DSY2492
Hypothetical protein; Similarity to COG1960 Acyl-CoA dehydrogenases(Evalue: 1E-171).
  
 
 0.651
DSY2491
Hypothetical protein; Similarity to COG1250 3-Hydroxyacyl-CoA dehydrogenase(Evalue: 3E-97).
     
 0.460
DSY2495
Hypothetical protein; Similarity to COG0477 Permeases of the major facilitator superfamily(Evalue: 1E-54).
       0.408
Your Current Organism:
Desulfitobacterium hafniense
NCBI taxonomy Id: 138119
Other names: D. hafniense Y51, Desulfitobacterium hafniense Y51, Desulfitobacterium hafniense str. Y51, Desulfitobacterium hafniense strain Y51, Desulfitobacterium sp. Y51
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.