STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pyrBHypothetical protein; Similarity to COG0540 Aspartate carbamoyltransferase, catalytic chain(Evalue: 1E-80); Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. (312 aa)    
Predicted Functional Partners:
carB-2
Hypothetical protein; Similarity to COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ)(Evalue: 0); Belongs to the CarB family.
 
 0.999
carA-2
Hypothetical protein; Similarity to COG0505 Carbamoylphosphate synthase small subunit(Evalue: 5E-84); Belongs to the CarA family.
 
 0.999
pyrC
Hypothetical protein; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.
 0.999
pyrR
Hypothetical protein; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant; Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily.
 
 0.999
DSY3585
Hypothetical protein; Similarity to COG0044 Dihydroorotase and related cyclic amidohydrolases(Evalue: 7E-53).
 0.999
DSY0398
Hypothetical protein; Similarity to COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ)(Evalue: 0); Belongs to the CarB family.
 
 0.998
carB
Hypothetical protein; Similarity to COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ)(Evalue: 0); Belongs to the CarB family.
 
 0.998
carA
Hypothetical protein; Similarity to COG0505 Carbamoylphosphate synthase small subunit(Evalue: 1E-100); Belongs to the CarA family.
 
 0.998
DSY4348
Hypothetical protein; Similarity to COG0044 Dihydroorotase and related cyclic amidohydrolases(Evalue: 3E-59).
 
 0.991
DSY4163
Hypothetical protein; Similarity to COG0044 Dihydroorotase and related cyclic amidohydrolases(Evalue: 2E-75).
 
 0.990
Your Current Organism:
Desulfitobacterium hafniense
NCBI taxonomy Id: 138119
Other names: D. hafniense Y51, Desulfitobacterium hafniense Y51, Desulfitobacterium hafniense str. Y51, Desulfitobacterium hafniense strain Y51, Desulfitobacterium sp. Y51
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