STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DSY4504Hypothetical protein; Similarity to COG0330 Membrane protease subunits, stomatin/prohibitin homologs(Evalue: 3E-36). (278 aa)    
Predicted Functional Partners:
ftsH
Hypothetical protein; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
   
 0.708
ftsH-2
Hypothetical protein; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
   
 0.708
ftsH-3
Hypothetical protein; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
   
 0.708
DSY1963
Hypothetical protein; Similarity to COG0465 ATP-dependent Zn proteases(Evalue: 1E-83); Belongs to the AAA ATPase family.
   
 0.706
DSY2506
Hypothetical protein; Similarity to COG0612 Predicted Zn-dependent peptidases(Evalue: 1E-109); Belongs to the peptidase M16 family.
  
 0.593
DSY2109
Hypothetical protein; Similarity to COG1077 HSP70 class molecular chaperones involved in cell morphogenesis.
 
 0.577
DSY1748
Hypothetical protein; Similarity to COG1030 Membrane-bound serine protease (ClpP class)(Evalue: 2E-21).
  
  
 0.522
DSY5057
Similarity to COG0706 Preprotein translocase subunit YidC(Evalue: 3E-35).
  
 
 0.494
nuoF
NADH dehydrogenase I chain F; Similarity to COG1894 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit(Evalue: 0).
   
 
 0.483
DSY2136
Hypothetical protein.
 
  
 0.477
Your Current Organism:
Desulfitobacterium hafniense
NCBI taxonomy Id: 138119
Other names: D. hafniense Y51, Desulfitobacterium hafniense Y51, Desulfitobacterium hafniense str. Y51, Desulfitobacterium hafniense strain Y51, Desulfitobacterium sp. Y51
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.