STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DSY4634Similarity to COG0790 TPR repeat proteins. (557 aa)    
Predicted Functional Partners:
DSY4633
Hypothetical protein.
 
     0.878
DSY4632
Hypothetical protein; Similarity to COG3505 Type IV secretory pathway, VirD4 components.
 
     0.875
DSY4537
Hypothetical protein.
 
     0.784
DSY0029
Hypothetical protein.
 
     0.782
DSY4547
Hypothetical protein.
 
     0.781
DSY4635
Hypothetical protein.
       0.781
DSY4647
Hypothetical protein.
 
     0.781
DSY0038
Hypothetical protein.
 
     0.780
DSY0855
Hypothetical protein; Similarity to COG3505 Type IV secretory pathway, VirD4 components.
 
     0.780
DSY4611
Hypothetical protein.
 
     0.780
Your Current Organism:
Desulfitobacterium hafniense
NCBI taxonomy Id: 138119
Other names: D. hafniense Y51, Desulfitobacterium hafniense Y51, Desulfitobacterium hafniense str. Y51, Desulfitobacterium hafniense strain Y51, Desulfitobacterium sp. Y51
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.