STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DSY4929Hypothetical protein; Similarity to COG0698 Ribose 5-phosphate isomerase RpiB(Evalue: 2E-39). (154 aa)    
Predicted Functional Partners:
DSY4928
Hypothetical protein; Belongs to the UPF0340 family.
 
  
 0.986
glyA
Hypothetical protein; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
 
    0.979
upp
Hypothetical protein; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.
 
  
 0.969
DSY4930
Similarity to COG0394 Protein-tyrosine-phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
 
    0.962
DSY3012
Hypothetical protein; Similarity to COG0036 Pentose-5-phosphate-3-epimerase(Evalue: 3E-32).
 
 
 0.957
DSY2683
Hypothetical protein; Similarity to COG0036 Pentose-5-phosphate-3-epimerase(Evalue: 3E-71); Belongs to the ribulose-phosphate 3-epimerase family.
 
 
 0.951
DSY4867
Hypothetical protein; Similarity to COG0021 Transketolase(Evalue: 1E-84).
 
 
 0.936
DSY4868
Hypothetical protein; Similarity to COG0021 Transketolase(Evalue: 3E-83).
 
 
 0.933
prs
Hypothetical protein; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.
    
 0.930
DSY1669
Hypothetical protein; Similarity to COG1109 Phosphomannomutase(Evalue: 1E-142).
     
 0.911
Your Current Organism:
Desulfitobacterium hafniense
NCBI taxonomy Id: 138119
Other names: D. hafniense Y51, Desulfitobacterium hafniense Y51, Desulfitobacterium hafniense str. Y51, Desulfitobacterium hafniense strain Y51, Desulfitobacterium sp. Y51
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.