STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000744775_00974Unannotated protein. (281 aa)    
Predicted Functional Partners:
GCA_000744775_00707
Unannotated protein.
  
 0.864
GCA_000744775_00195
Unannotated protein.
   
 
  0.791
GCA_000744775_01317
Unannotated protein.
  
     0.577
GCA_000744775_00973
Unannotated protein.
     
 0.551
GCA_000744775_00743
Unannotated protein.
  
  
 0.538
GCA_000744775_00972
Unannotated protein.
       0.528
GCA_000744775_00145
Unannotated protein.
   
  0.514
GCA_000744775_02363
Unannotated protein.
   
  0.514
GCA_000744775_00975
Unannotated protein.
       0.504
GCA_000744775_00356
Unannotated protein.
  
 0.454
Your Current Organism:
Thermorudis peleae
NCBI taxonomy Id: 1382356
Other names: ATCC BAA-2536, DSM 27169, T. peleae, Thermomicrobiales bacterium KI4, Thermorudis peleae King and King 2014 emend. Houghton et al. 2015, strain KI4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.