STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CD33_16775Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (379 aa)    
Predicted Functional Partners:
CD33_18580
2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.838
CD33_08550
2-amino-3-ketobutyrate CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.695
CD33_05845
Manganese catalase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.691
CD33_19375
Quinonprotein alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.670
CD33_04930
Pyruvate kinase; Catalyzes the formation of phosphoenolpyruvate from pyruvate; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.648
CD33_12870
Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.647
CD33_12810
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.640
CD33_11535
Catalyzes the oxidation of acetaldehyde, benzaldehyde, propionaldehyde and other aldehydes; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.590
CD33_16945
Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family.
  
  0.590
CD33_13930
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.565
Your Current Organism:
Lysinibacillus sinduriensis
NCBI taxonomy Id: 1384057
Other names: Bacillus sp. BLB-1, L. sinduriensis BLB-1 = JCM 15800, Lysinibacillus sinduriensis BLB-1, Lysinibacillus sinduriensis BLB-1 = JCM 15800, Lysinibacillus sinduriensis JCM 15800, Lysinibacillus sinduriensis KCTC 13296
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.