STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJB94346.1Cytidyltransferase; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose. In the N-terminal section; belongs to the carbohydrate kinase PfkB family. (515 aa)    
Predicted Functional Partners:
KJB94345.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.988
KJB95561.1
D,D-heptose 1,7-bisphosphate phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.931
KJB95562.1
Phosphoheptose isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.898
KJB90243.1
Sugar isomerase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.898
KJB94337.1
SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.874
KJB94343.1
Transketolase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.842
KJB96751.1
UDP-glucose 4-epimerase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.842
KJB90246.1
UDP-glucose 4-epimerase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.842
KJB95563.1
Mannose-1-phosphate guanyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.833
KJB90244.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.829
Your Current Organism:
Skermanella aerolata
NCBI taxonomy Id: 1385368
Other names: S. aerolata KACC 11604, Skermanella aerolata 5416T-32, Skermanella aerolata DSM 18479, Skermanella aerolata KACC 11604
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.